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[ Source: biosquid  ]

Package: biosquid (1.9g+cvs20050121-1)

utilities for biological sequence analysis

SQUID is a library of C code functions for sequence analysis. It also includes a number of small utility programs to convert, show statistics, manipulate and do other functions on sequence files.

The original name of the package is "squid", but since there is already a squid on the archive (a proxy cache), it was renamed to "biosquid".

 Homepage: http://selab.wustl.edu/cgi-bin/selab.pl?mode=software

Tags: Software Development: C Development, Field: Biology, Implemented in: C, User Interface: Command Line, Role: Program

Other Packages Related to biosquid

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.3.5-1) [not alpha, i386, ia64]
    GNU C Library: Shared libraries
    dep: libc6 (>= 2.3.6-6) [i386]
  • dep: libc6.1 (>= 2.3.5-1) [alpha, ia64]
    GNU C Library: Shared libraries
  • rec: hmmer (>> 2.1.4)
    profile hidden Markov models for protein sequence analysis

Download biosquid

Download for all available architectures
Architecture Package Size Installed Size Files
alpha 855.6 kB2084 kB [list of files]
amd64 742.8 kB1644 kB [list of files]
arm 657.7 kB1282 kB [list of files]
hppa 778.1 kB1616 kB [list of files]
i386 685.4 kB1492 kB [list of files]
ia64 1,150.9 kB3304 kB [list of files]
mips 776.5 kB2080 kB [list of files]
mipsel 780.9 kB2080 kB [list of files]
powerpc 729.8 kB1668 kB [list of files]
s390 714.4 kB1580 kB [list of files]
sparc 669.9 kB1496 kB [list of files]